In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074624334.1
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14 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 22048586 | 22048586 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1565 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHH | NC_133882.1 | 22048587 | 22048587 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1564 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHH | NC_133882.1 | 22048598 | 22048598 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1553 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHH | NC_133882.1 | 22048600 | 22048600 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1551 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHH | NC_133882.1 | 22048798 | 22048798 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1353 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHH | NC_133882.1 | 22048800 | 22048800 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1351 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048575 | 22048575 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1576 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048583 | 22048583 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1568 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048595 | 22048595 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1556 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048611 | 22048611 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1540 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048791 | 22048791 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1360 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CHG | NC_133882.1 | 22048804 | 22048804 | 0.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1347 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CG | NC_133882.1 | 22048578 | 22048578 | 1.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1573 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
| CG | NC_133882.1 | 22048616 | 22048616 | 1.0 | Promoter | NC_133882.1 | 22042963 | 22050151 | 7189 | 1535 | XP_074624334.1 | uncharacterized protein LOC141882247 | JBrowse |
