In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074624496.1
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22 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133886.1 | 21414929 | 21414929 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13205 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414932 | 21414932 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13208 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414933 | 21414933 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13209 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414945 | 21414945 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13221 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414947 | 21414947 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13223 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414952 | 21414952 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13228 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414958 | 21414958 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13234 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414981 | 21414981 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13257 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414983 | 21414983 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13259 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21414994 | 21414994 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13270 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHH | NC_133886.1 | 21415023 | 21415023 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13299 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414949 | 21414949 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13225 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414964 | 21414964 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13240 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414974 | 21414974 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13250 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414984 | 21414984 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13260 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414989 | 21414989 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13265 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CHG | NC_133886.1 | 21414999 | 21414999 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13275 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CG | NC_133886.1 | 21414965 | 21414965 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13241 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CG | NC_133886.1 | 21414968 | 21414968 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13244 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CG | NC_133886.1 | 21415006 | 21415006 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13282 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CG | NC_133886.1 | 21415008 | 21415008 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13284 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
| CG | NC_133886.1 | 21415017 | 21415017 | 0.0 | Intron | NC_133886.1 | 21401724 | 21409294 | 7571 | 13293 | XP_074624496.1 | uncharacterized protein LOC141882448 isoform X2 | JBrowse |
