In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074624855.1
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 5458895 | 5458895 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5600 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHH | NC_133882.1 | 5458898 | 5458898 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5603 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHH | NC_133882.1 | 5458903 | 5458903 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5608 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHH | NC_133882.1 | 5458908 | 5458908 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5613 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHH | NC_133882.1 | 5458917 | 5458917 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5622 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHH | NC_133882.1 | 5458925 | 5458925 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5630 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CHG | NC_133882.1 | 5458922 | 5458922 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5627 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
| CG | NC_133882.1 | 5458911 | 5458911 | 0.0 | Distal Intergenic | NC_133882.1 | 5450594 | 5453295 | 2702 | -5616 | XP_074624855.1 | uncharacterized protein LOC141883313 | JBrowse |
