In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074624940.1
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15 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 4584941 | 4584941 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12033 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584943 | 4584943 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12031 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584948 | 4584948 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12026 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584951 | 4584951 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12023 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584952 | 4584952 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12022 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584964 | 4584964 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12010 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584965 | 4584965 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 12009 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584982 | 4584982 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11992 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584983 | 4584983 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11991 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584986 | 4584986 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11988 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584998 | 4584998 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11976 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHH | NC_133887.1 | 4584999 | 4584999 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11975 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHG | NC_133887.1 | 4584995 | 4584995 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11979 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHG | NC_133887.1 | 4585018 | 4585018 | 0.0 | Intron | NC_133887.1 | 4593462 | 4596974 | 3513 | 11956 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
| CHG | NC_133887.1 | 4585085 | 4585085 | 0.0 | Exon | NC_133887.1 | 4593462 | 4596974 | 3513 | 11889 | XP_074624940.1 | proteasome assembly chaperone 1-like | JBrowse |
