In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074625192.1
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24 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 6356759 | 6356759 | 0.333333333333333 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3288 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356764 | 6356764 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3293 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356769 | 6356769 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3298 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356775 | 6356775 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3304 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356779 | 6356779 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3308 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356781 | 6356781 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3310 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356783 | 6356783 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3312 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356789 | 6356789 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3318 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356801 | 6356801 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3330 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356807 | 6356807 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3336 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356826 | 6356826 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3355 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356827 | 6356827 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3356 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356828 | 6356828 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3357 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356841 | 6356841 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3370 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356842 | 6356842 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3371 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356844 | 6356844 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3373 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356854 | 6356854 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3383 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356863 | 6356863 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3392 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHH | NC_133887.1 | 6356865 | 6356865 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3394 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHG | NC_133887.1 | 6356804 | 6356804 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3333 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHG | NC_133887.1 | 6356816 | 6356816 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3345 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHG | NC_133887.1 | 6356819 | 6356819 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3348 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHG | NC_133887.1 | 6356836 | 6356836 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3365 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
| CHG | NC_133887.1 | 6356870 | 6356870 | 0.0 | Intron | NC_133887.1 | 6353471 | 6361690 | 8220 | 3399 | XP_074625192.1 | chromatin assembly factor 1 subunit B-like | JBrowse |
