In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074625906.1
📊
20 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 4730279 | 4730279 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5944 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730282 | 4730282 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5941 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730309 | 4730309 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5914 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730310 | 4730310 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5913 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730320 | 4730320 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5903 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730321 | 4730321 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5902 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730325 | 4730325 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5898 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730330 | 4730330 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5893 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730333 | 4730333 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5890 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730339 | 4730339 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5884 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730340 | 4730340 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5883 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730349 | 4730349 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5874 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730350 | 4730350 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5873 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730357 | 4730357 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5866 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHH | NC_133887.1 | 4730360 | 4730360 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5863 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHG | NC_133887.1 | 4730290 | 4730290 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5933 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHG | NC_133887.1 | 4730343 | 4730343 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5880 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CHG | NC_133887.1 | 4730353 | 4730353 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5870 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CG | NC_133887.1 | 4730327 | 4730327 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5896 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
| CG | NC_133887.1 | 4730352 | 4730352 | 0.0 | Intron | NC_133887.1 | 4736223 | 4752200 | 15978 | -5871 | XP_074625906.1 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like isoform X1 | JBrowse |
