In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074626346.1
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18 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 19088848 | 19088848 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2959 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088870 | 19088870 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2937 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088889 | 19088889 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2918 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088890 | 19088890 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2917 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088910 | 19088910 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2897 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088936 | 19088936 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2871 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088937 | 19088937 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2870 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088941 | 19088941 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2866 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHH | NC_133887.1 | 19088967 | 19088967 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2840 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088831 | 19088831 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2976 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088884 | 19088884 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2923 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088901 | 19088901 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2906 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088924 | 19088924 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2883 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088930 | 19088930 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2877 | XP_074626346.1 | streptavidin-like | JBrowse |
| CHG | NC_133887.1 | 19088956 | 19088956 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2851 | XP_074626346.1 | streptavidin-like | JBrowse |
| CG | NC_133887.1 | 19088830 | 19088830 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2977 | XP_074626346.1 | streptavidin-like | JBrowse |
| CG | NC_133887.1 | 19088835 | 19088835 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2972 | XP_074626346.1 | streptavidin-like | JBrowse |
| CG | NC_133887.1 | 19088859 | 19088859 | 0.0 | Promoter | NC_133887.1 | 19086903 | 19091807 | 4905 | 2948 | XP_074626346.1 | streptavidin-like | JBrowse |
