In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074626422.1
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21 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 5526827 | 5526827 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11921 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526837 | 5526837 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11911 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526840 | 5526840 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11908 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526842 | 5526842 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11906 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526850 | 5526850 | 0.333333333333333 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11898 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526853 | 5526853 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11895 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526854 | 5526854 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11894 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526860 | 5526860 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11888 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526866 | 5526866 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11882 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526869 | 5526869 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11879 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5526892 | 5526892 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11856 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5528547 | 5528547 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10201 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5528549 | 5528549 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10199 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5528551 | 5528551 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10197 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHH | NC_133887.1 | 5528567 | 5528567 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10181 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHG | NC_133887.1 | 5526833 | 5526833 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11915 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHG | NC_133887.1 | 5526886 | 5526886 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11862 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CHG | NC_133887.1 | 5528561 | 5528561 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10187 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CG | NC_133887.1 | 5526873 | 5526873 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 11875 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CG | NC_133887.1 | 5528553 | 5528553 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10195 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
| CG | NC_133887.1 | 5528563 | 5528563 | 0.0 | Intron | NC_133887.1 | 5522878 | 5538748 | 15871 | 10185 | XP_074626422.1 | uncharacterized protein LOC141884523 | JBrowse |
