In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074626441.1
📊
9 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 4106424 | 4106424 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4767 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106426 | 4106426 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4765 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106449 | 4106449 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4742 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106451 | 4106451 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4740 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106452 | 4106452 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4739 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106454 | 4106454 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4737 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CHH | NC_133887.1 | 4106480 | 4106480 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4711 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CG | NC_133887.1 | 4106476 | 4106476 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4715 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
| CG | NC_133887.1 | 4106482 | 4106482 | 0.0 | Intron | NC_133887.1 | 4099456 | 4111191 | 11736 | 4709 | XP_074626441.1 | centrosomal protein of 85 kDa-like | JBrowse |
