In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074626459.1
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3 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 17776535 | 17776535 | 0.0 | Promoter | NC_133887.1 | 17777452 | 17781338 | 3887 | -917 | XP_074626459.1 | transmembrane protein 107-like | JBrowse |
| CHH | NC_133887.1 | 17776536 | 17776536 | 0.0 | Promoter | NC_133887.1 | 17777452 | 17781338 | 3887 | -916 | XP_074626459.1 | transmembrane protein 107-like | JBrowse |
| CHG | NC_133887.1 | 17776537 | 17776537 | 0.0 | Promoter | NC_133887.1 | 17777452 | 17781338 | 3887 | -915 | XP_074626459.1 | transmembrane protein 107-like | JBrowse |
