In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_4
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_4) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_4 •
Gene: XP_074627168.1
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3 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 2886711 | 2886711 | 0.0 | Intron | NC_133882.1 | 2882194 | 2889187 | 6994 | 4517 | XP_074627168.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like | JBrowse |
| CHH | NC_133882.1 | 2886751 | 2886751 | 0.0 | Intron | NC_133882.1 | 2882194 | 2889187 | 6994 | 4557 | XP_074627168.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like | JBrowse |
| CHH | NC_133882.1 | 2886771 | 2886771 | 0.0 | Intron | NC_133882.1 | 2882194 | 2889187 | 6994 | 4577 | XP_074627168.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like | JBrowse |
