In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074627306.1
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41 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133887.1 | 7899682 | 7899682 | 0.0 | Exon | NC_133887.1 | 7898617 | 7903410 | 4794 | 3728 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899684 | 7899684 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3726 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899695 | 7899695 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3715 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899708 | 7899708 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3702 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899716 | 7899716 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3694 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899721 | 7899721 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3689 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899727 | 7899727 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3683 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899730 | 7899730 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3680 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899743 | 7899743 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3667 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899747 | 7899747 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3663 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899757 | 7899757 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3653 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899758 | 7899758 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3652 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899759 | 7899759 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3651 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899760 | 7899760 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3650 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899783 | 7899783 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3627 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899795 | 7899795 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3615 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899812 | 7899812 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3598 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899816 | 7899816 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3594 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899819 | 7899819 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3591 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899820 | 7899820 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3590 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899822 | 7899822 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3588 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899826 | 7899826 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3584 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899833 | 7899833 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3577 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899838 | 7899838 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3572 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899844 | 7899844 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3566 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899846 | 7899846 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3564 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899848 | 7899848 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3562 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899856 | 7899856 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3554 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899860 | 7899860 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3550 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899862 | 7899862 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3548 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899863 | 7899863 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3547 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899871 | 7899871 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3539 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899872 | 7899872 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3538 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899874 | 7899874 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3536 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899879 | 7899879 | 0.333333333333333 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3531 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHH | NC_133887.1 | 7899881 | 7899881 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3529 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHG | NC_133887.1 | 7899857 | 7899857 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3553 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHG | NC_133887.1 | 7899864 | 7899864 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3546 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CHG | NC_133887.1 | 7899884 | 7899884 | 0.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3526 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CG | NC_133887.1 | 7899810 | 7899810 | 1.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3600 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
| CG | NC_133887.1 | 7899829 | 7899829 | 1.0 | Intron | NC_133887.1 | 7898617 | 7903410 | 4794 | 3581 | XP_074627306.1 | radial spoke head protein 3 homolog | JBrowse |
