In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074628265.1
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4 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133888.1 | 15380117 | 15380117 | 0.25 | Intron | NC_133888.1 | 15372827 | 15384727 | 11901 | 4610 | XP_074628265.1 | uncharacterized protein LOC141886124 isoform X3 | JBrowse |
| CHG | NC_133888.1 | 15380118 | 15380118 | 0.25 | Exon | NC_133888.1 | 15372827 | 15384727 | 11901 | 4609 | XP_074628265.1 | uncharacterized protein LOC141886124 isoform X3 | JBrowse |
| CG | NC_133888.1 | 15380122 | 15380122 | 0.0 | Exon | NC_133888.1 | 15372827 | 15384727 | 11901 | 4605 | XP_074628265.1 | uncharacterized protein LOC141886124 isoform X3 | JBrowse |
| CG | NC_133888.1 | 15380126 | 15380126 | 0.25 | Exon | NC_133888.1 | 15372827 | 15384727 | 11901 | 4601 | XP_074628265.1 | uncharacterized protein LOC141886124 isoform X3 | JBrowse |
