In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_3 •
Gene: XP_074628608.1
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10 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133888.1 | 18747503 | 18747503 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23286 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CHH | NC_133888.1 | 18747519 | 18747519 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23302 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CHH | NC_133888.1 | 18747524 | 18747524 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23307 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CHG | NC_133888.1 | 18747497 | 18747497 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23280 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747496 | 18747496 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23279 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747506 | 18747506 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23289 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747509 | 18747509 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23292 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747516 | 18747516 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23299 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747526 | 18747526 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23309 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
| CG | NC_133888.1 | 18747533 | 18747533 | 0.0 | Distal Intergenic | NC_133888.1 | 18719692 | 18724217 | 4526 | -23316 | XP_074628608.1 | lysosomal phospholipase A and acyltransferase-like | JBrowse |
