In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074628836.1
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32 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133888.1 | 21334780 | 21334780 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1679 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334788 | 21334788 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1671 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334789 | 21334789 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1670 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334799 | 21334799 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1660 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334823 | 21334823 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1636 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334824 | 21334824 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1635 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334825 | 21334825 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1634 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334826 | 21334826 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1633 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334830 | 21334830 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1629 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334846 | 21334846 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1613 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334847 | 21334847 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1612 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334852 | 21334852 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1607 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334853 | 21334853 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1606 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334866 | 21334866 | 0.333333333333333 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1593 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334881 | 21334881 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1578 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334885 | 21334885 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1574 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334893 | 21334893 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1566 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334898 | 21334898 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1561 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334900 | 21334900 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1559 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHH | NC_133888.1 | 21334902 | 21334902 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1557 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHG | NC_133888.1 | 21334783 | 21334783 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1676 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHG | NC_133888.1 | 21334786 | 21334786 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1673 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHG | NC_133888.1 | 21334829 | 21334829 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1630 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHG | NC_133888.1 | 21334861 | 21334861 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1598 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CHG | NC_133888.1 | 21334872 | 21334872 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1587 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334760 | 21334760 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1699 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334794 | 21334794 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1665 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334858 | 21334858 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1601 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334860 | 21334860 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1599 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334875 | 21334875 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1584 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334878 | 21334878 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1581 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
| CG | NC_133888.1 | 21334904 | 21334904 | 0.0 | Promoter | NC_133888.1 | 21336459 | 21347069 | 10611 | -1555 | XP_074628836.1 | homeobox protein otx5-B-like | JBrowse |
