In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074629059.1
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30 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133888.1 | 1222937 | 1222937 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18909 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222940 | 1222940 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18912 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222947 | 1222947 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18919 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222958 | 1222958 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18930 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222959 | 1222959 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18931 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222964 | 1222964 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18936 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222968 | 1222968 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18940 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222986 | 1222986 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18958 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222987 | 1222987 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18959 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222988 | 1222988 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18960 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1222990 | 1222990 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18962 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223004 | 1223004 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18976 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223011 | 1223011 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18983 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223017 | 1223017 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18989 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223028 | 1223028 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19000 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223066 | 1223066 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19038 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223071 | 1223071 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19043 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223076 | 1223076 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19048 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1223096 | 1223096 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19068 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223022 | 1223022 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 18994 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223045 | 1223045 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19017 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223048 | 1223048 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19020 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223060 | 1223060 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19032 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223078 | 1223078 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19050 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1223083 | 1223083 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19055 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1223026 | 1223026 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 18998 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1223061 | 1223061 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19033 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1223088 | 1223088 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19060 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1223092 | 1223092 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19064 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1223094 | 1223094 | 0.0 | Exon | NC_133888.1 | 1204028 | 1281614 | 77587 | 19066 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
