In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_4
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_4) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_4 •
Gene: XP_074629059.1
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32 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133888.1 | 1215487 | 1215487 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11459 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215488 | 1215488 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11460 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215492 | 1215492 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11464 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215497 | 1215497 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11469 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215512 | 1215512 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11484 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215513 | 1215513 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11485 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215518 | 1215518 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11490 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215534 | 1215534 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11506 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215535 | 1215535 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11507 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215541 | 1215541 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11513 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215542 | 1215542 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11514 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215546 | 1215546 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11518 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215548 | 1215548 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11520 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215554 | 1215554 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11526 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215568 | 1215568 | 0.333333333333333 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11540 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215569 | 1215569 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11541 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215577 | 1215577 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11549 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215578 | 1215578 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11550 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215603 | 1215603 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11575 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHH | NC_133888.1 | 1215604 | 1215604 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11576 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1215538 | 1215538 | 1.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11510 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1215575 | 1215575 | 1.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11547 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1215608 | 1215608 | 1.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11580 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CG | NC_133888.1 | 1215614 | 1215614 | 1.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11586 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215472 | 1215472 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11444 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215507 | 1215507 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11479 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215517 | 1215517 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11489 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215529 | 1215529 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11501 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215539 | 1215539 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11511 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215563 | 1215563 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11535 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215596 | 1215596 | 0.0 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11568 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
| CHG | NC_133888.1 | 1215601 | 1215601 | 0.333333333333333 | Intron | NC_133888.1 | 1204028 | 1281614 | 77587 | 11573 | XP_074629059.1 | myosin-IIIb-like | JBrowse |
