In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074629977.1
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23 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133889.1 | 4341393 | 4341393 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2052 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341396 | 4341396 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2055 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341399 | 4341399 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2058 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341411 | 4341411 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2070 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341412 | 4341412 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2071 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341438 | 4341438 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2097 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341439 | 4341439 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2098 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341451 | 4341451 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2110 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341465 | 4341465 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2124 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341466 | 4341466 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2125 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341469 | 4341469 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2128 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341471 | 4341471 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2130 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341473 | 4341473 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2132 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341485 | 4341485 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2144 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341491 | 4341491 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2150 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341499 | 4341499 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2158 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341502 | 4341502 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2161 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341503 | 4341503 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2162 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341505 | 4341505 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2164 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHH | NC_133889.1 | 4341518 | 4341518 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2177 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHG | NC_133889.1 | 4341416 | 4341416 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2075 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHG | NC_133889.1 | 4341433 | 4341433 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2092 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
| CHG | NC_133889.1 | 4341489 | 4341489 | 0.0 | Promoter | NC_133889.1 | 4309397 | 4339341 | 29945 | -2148 | XP_074629977.1 | RNA helicase aquarius-like | JBrowse |
