In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074630946.1
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39 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133889.1 | 13769165 | 13769165 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3434 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769166 | 13769166 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3433 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769177 | 13769177 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3422 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769179 | 13769179 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3420 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769180 | 13769180 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3419 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769181 | 13769181 | 0.333333333333333 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3418 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769205 | 13769205 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3394 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769206 | 13769206 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3393 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769209 | 13769209 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3390 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769219 | 13769219 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3380 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769234 | 13769234 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3365 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769254 | 13769254 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3345 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769257 | 13769257 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3342 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769261 | 13769261 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3338 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769271 | 13769271 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3328 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769275 | 13769275 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3324 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769298 | 13769298 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3301 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769301 | 13769301 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3298 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769303 | 13769303 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3296 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769314 | 13769314 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3285 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769328 | 13769328 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3271 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769334 | 13769334 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3265 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769335 | 13769335 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3264 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769343 | 13769343 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3256 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769347 | 13769347 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3252 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769353 | 13769353 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3246 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769355 | 13769355 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3244 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHH | NC_133889.1 | 13769365 | 13769365 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3234 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769188 | 13769188 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3411 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769226 | 13769226 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3373 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769241 | 13769241 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3358 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769278 | 13769278 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3321 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769284 | 13769284 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3315 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769317 | 13769317 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3282 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CHG | NC_133889.1 | 13769351 | 13769351 | 0.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3248 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CG | NC_133889.1 | 13769216 | 13769216 | 0.666666666666667 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3383 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CG | NC_133889.1 | 13769357 | 13769357 | 1.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3242 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CG | NC_133889.1 | 13769369 | 13769369 | 1.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3230 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
| CG | NC_133889.1 | 13769371 | 13769371 | 1.0 | Intron | NC_133889.1 | 13770773 | 13772599 | 1827 | 3228 | XP_074630946.1 | thiopurine S-methyltransferase-like | JBrowse |
