DNA Methylation Analysis

DNA Methylation Analysis

In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.

Species

Stages/Organs

Tissue/Organ

Gene ID

Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2

The distribution of three methylation motif types in Acropora palmata

The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata

🔬

Query Parameters

Species: Acropora palmata • Stage: • Tissue: Polyp_Underside_Control_2 • Gene: XP_074631107.1

📊 31 methylation records found

Motif type	Chr/Scaffold/Contig	start	end	methylation level	peak location	Chr/Scaffold/Contig	geneStart	geneEnd	geneLength	distanceToTSS	Protein id	Description	Visualization
CHH	NC_133882.1	3064090	3064090	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-325	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064094	3064094	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-321	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064103	3064103	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-312	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064120	3064120	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-295	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064124	3064124	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-291	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064131	3064131	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-284	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064132	3064132	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-283	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064157	3064157	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-258	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064161	3064161	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-254	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064163	3064163	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-252	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064167	3064167	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-248	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064171	3064171	0.333333333333333	Promoter	NC_133882.1	3064415	3082562	18148	-244	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064172	3064172	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-243	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064176	3064176	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-239	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064178	3064178	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-237	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064179	3064179	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-236	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064185	3064185	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-230	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064192	3064192	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-223	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064203	3064203	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-212	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064210	3064210	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-205	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064211	3064211	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-204	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064213	3064213	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-202	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064217	3064217	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-198	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064221	3064221	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-194	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064226	3064226	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-189	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHH	NC_133882.1	3064235	3064235	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-180	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHG	NC_133882.1	3064058	3064058	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-357	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CHG	NC_133882.1	3064073	3064073	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-342	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CG	NC_133882.1	3064054	3064054	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-361	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CG	NC_133882.1	3064074	3064074	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-341	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse
CG	NC_133882.1	3064237	3064237	0.0	Promoter	NC_133882.1	3064415	3082562	18148	-178	XP_074631107.1	uncharacterized protein LOC141889683	JBrowse