In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074632812.1
📊
2 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133890.1 | 16235531 | 16235531 | 0.0 | Intron | NC_133890.1 | 16216861 | 16231573 | 14713 | -3958 | XP_074632812.1 | transforming growth factor beta regulator 1-like isoform X3 | JBrowse |
| CG | NC_133890.1 | 16235534 | 16235534 | 0.0 | Intron | NC_133890.1 | 16216861 | 16231573 | 14713 | -3961 | XP_074632812.1 | transforming growth factor beta regulator 1-like isoform X3 | JBrowse |
