In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074633935.1
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133890.1 | 21240348 | 21240348 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 2012 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHH | NC_133890.1 | 21240355 | 21240355 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 2005 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHH | NC_133890.1 | 21240371 | 21240371 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 1989 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHH | NC_133890.1 | 21240377 | 21240377 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 1983 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHH | NC_133890.1 | 21240401 | 21240401 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 1959 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHH | NC_133890.1 | 21240404 | 21240404 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 1956 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHG | NC_133890.1 | 21240341 | 21240341 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 2019 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
| CHG | NC_133890.1 | 21240374 | 21240374 | 0.0 | Promoter | NC_133890.1 | 21217670 | 21242360 | 24691 | 1986 | XP_074633935.1 | cilia- and flagella-associated protein 44-like | JBrowse |
