In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_4
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_4) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_4 •
Gene: XP_074634374.1
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9 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133890.1 | 19176452 | 19176452 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2508 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176465 | 19176465 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2495 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176472 | 19176472 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2488 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176476 | 19176476 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2484 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176499 | 19176499 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2461 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176507 | 19176507 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2453 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176508 | 19176508 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2452 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176520 | 19176520 | 0.0 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2440 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
| CHH | NC_133890.1 | 19176521 | 19176521 | 0.333333333333333 | Promoter | NC_133890.1 | 19168270 | 19178960 | 10691 | 2439 | XP_074634374.1 | etoposide-induced protein 2.4 homolog isoform X1 | JBrowse |
