In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074634819.1
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23 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133890.1 | 17868856 | 17868856 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1775 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868857 | 17868857 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1776 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868858 | 17868858 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1777 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868862 | 17868862 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1781 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868885 | 17868885 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1804 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868886 | 17868886 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1805 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868888 | 17868888 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1807 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868894 | 17868894 | 0.333333333333333 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1813 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868899 | 17868899 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1818 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868908 | 17868908 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1827 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868912 | 17868912 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1831 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868914 | 17868914 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1833 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868925 | 17868925 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1844 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868934 | 17868934 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1853 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868969 | 17868969 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1888 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868971 | 17868971 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1890 | XP_074634819.1 | borealin-like | JBrowse |
| CHH | NC_133890.1 | 17868973 | 17868973 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1892 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868872 | 17868872 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1791 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868878 | 17868878 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1797 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868921 | 17868921 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1840 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868943 | 17868943 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1862 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868953 | 17868953 | 0.333333333333333 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1872 | XP_074634819.1 | borealin-like | JBrowse |
| CHG | NC_133890.1 | 17868965 | 17868965 | 0.0 | Promoter | NC_133890.1 | 17867081 | 17876990 | 9910 | 1884 | XP_074634819.1 | borealin-like | JBrowse |
