In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074635566.1
📊
35 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 20102543 | 20102543 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4718 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102548 | 20102548 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4713 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102550 | 20102550 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4711 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102568 | 20102568 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4693 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102588 | 20102588 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4673 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102593 | 20102593 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4668 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102597 | 20102597 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4664 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102598 | 20102598 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4663 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102600 | 20102600 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4661 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102601 | 20102601 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4660 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102613 | 20102613 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4648 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102617 | 20102617 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4644 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102623 | 20102623 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4638 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102630 | 20102630 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4631 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102638 | 20102638 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4623 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102641 | 20102641 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4620 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102642 | 20102642 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4619 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102656 | 20102656 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4605 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102665 | 20102665 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4596 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102666 | 20102666 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4595 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102667 | 20102667 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4594 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102679 | 20102679 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4582 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102680 | 20102680 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4581 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102722 | 20102722 | 0.333333333333333 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4539 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 20102724 | 20102724 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4537 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102560 | 20102560 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4701 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102567 | 20102567 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4694 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102572 | 20102572 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4689 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102611 | 20102611 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4650 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102645 | 20102645 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4616 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 20102717 | 20102717 | 0.0 | Intron | NC_133882.1 | 20093942 | 20107261 | 13320 | 4544 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 20102571 | 20102571 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4690 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 20102577 | 20102577 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4684 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 20102586 | 20102586 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4675 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 20102620 | 20102620 | 0.0 | Exon | NC_133882.1 | 20093942 | 20107261 | 13320 | 4641 | XP_074635566.1 | lactadherin-like isoform X2 | JBrowse |
