In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_3 •
Gene: XP_074635686.1
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2 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 9185186 | 9185186 | 0.0 | Intron | NC_133891.1 | 9179959 | 9188079 | 8121 | 5227 | XP_074635686.1 | uncharacterized protein LOC141894042 | JBrowse |
| CHH | NC_133891.1 | 9185189 | 9185189 | 0.0 | Intron | NC_133891.1 | 9179959 | 9188079 | 8121 | 5230 | XP_074635686.1 | uncharacterized protein LOC141894042 | JBrowse |
