In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074635862.1
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45 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 4941731 | 4941731 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1304 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941737 | 4941737 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1310 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941739 | 4941739 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1312 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941743 | 4941743 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1316 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941748 | 4941748 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1321 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941752 | 4941752 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1325 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941759 | 4941759 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1332 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941776 | 4941776 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1349 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941778 | 4941778 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1351 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941779 | 4941779 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1352 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941780 | 4941780 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1353 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941793 | 4941793 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1366 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941808 | 4941808 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1381 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941810 | 4941810 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1383 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941832 | 4941832 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1405 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941833 | 4941833 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1406 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941838 | 4941838 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1411 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941846 | 4941846 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1419 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941848 | 4941848 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1421 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941849 | 4941849 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1422 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941850 | 4941850 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1423 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941851 | 4941851 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1424 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941852 | 4941852 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1425 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941853 | 4941853 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1426 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941858 | 4941858 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1431 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941861 | 4941861 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1434 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941868 | 4941868 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1441 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941870 | 4941870 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1443 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941873 | 4941873 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1446 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4941874 | 4941874 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1447 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4942025 | 4942025 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1598 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHH | NC_133891.1 | 4942038 | 4942038 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1611 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941803 | 4941803 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1376 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941807 | 4941807 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1380 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941816 | 4941816 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1389 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941829 | 4941829 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1402 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941856 | 4941856 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1429 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941865 | 4941865 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1438 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4941990 | 4941990 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1563 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4942015 | 4942015 | 0.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1588 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CHG | NC_133891.1 | 4942041 | 4942041 | 0.333333333333333 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1614 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CG | NC_133891.1 | 4941999 | 4941999 | 1.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1572 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CG | NC_133891.1 | 4942014 | 4942014 | 1.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1587 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CG | NC_133891.1 | 4942034 | 4942034 | 1.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1607 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
| CG | NC_133891.1 | 4942045 | 4942045 | 1.0 | Promoter | NC_133891.1 | 4940427 | 4969202 | 28776 | 1618 | XP_074635862.1 | HEAT repeat-containing protein 6-like | JBrowse |
