In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074636326.1
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17 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 15481937 | 15481937 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -320 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481938 | 15481938 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -319 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481940 | 15481940 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -317 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481949 | 15481949 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -308 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481950 | 15481950 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -307 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481952 | 15481952 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -305 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481961 | 15481961 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -296 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481963 | 15481963 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -294 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481980 | 15481980 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -277 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481982 | 15481982 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -275 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15481990 | 15481990 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -267 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15482004 | 15482004 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -253 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15482005 | 15482005 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -252 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15482006 | 15482006 | 0.0 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -251 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15482016 | 15482016 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -241 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHH | NC_133891.1 | 15482028 | 15482028 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -229 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
| CHG | NC_133891.1 | 15482024 | 15482024 | 0.333333333333333 | Promoter | NC_133891.1 | 15482257 | 15487606 | 5350 | -233 | XP_074636326.1 | uncharacterized protein LOC141894546 isoform X2 | JBrowse |
