In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074636407.1
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3 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 20597336 | 20597336 | 0.0 | Promoter | NC_133891.1 | 20596659 | 20598303 | 1645 | 677 | XP_074636407.1 | heme-binding protein 2-like | JBrowse |
| CG | NC_133891.1 | 20597338 | 20597338 | 0.0 | Promoter | NC_133891.1 | 20596659 | 20598303 | 1645 | 679 | XP_074636407.1 | heme-binding protein 2-like | JBrowse |
| CG | NC_133891.1 | 20597357 | 20597357 | 0.0 | Promoter | NC_133891.1 | 20596659 | 20598303 | 1645 | 698 | XP_074636407.1 | heme-binding protein 2-like | JBrowse |
