In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074637049.1
📊
9 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 4062081 | 4062081 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4523 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHH | NC_133891.1 | 4062089 | 4062089 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4531 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHH | NC_133891.1 | 4062093 | 4062093 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4535 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHH | NC_133891.1 | 4062110 | 4062110 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4552 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHH | NC_133891.1 | 4062116 | 4062116 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4558 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHH | NC_133891.1 | 4062125 | 4062125 | 0.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4567 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CHG | NC_133891.1 | 4062070 | 4062070 | 0.333333333333333 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4512 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CG | NC_133891.1 | 4062073 | 4062073 | 1.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4515 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
| CG | NC_133891.1 | 4062091 | 4062091 | 1.0 | 3' UTR | NC_133891.1 | 4057558 | 4062464 | 4907 | 4533 | XP_074637049.1 | NFATC2-interacting protein-like | JBrowse |
