In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074637404.1
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9 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133891.1 | 4209985 | 4209985 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1743 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHH | NC_133891.1 | 4210000 | 4210000 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1728 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHH | NC_133891.1 | 4210009 | 4210009 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1719 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHH | NC_133891.1 | 4210017 | 4210017 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1711 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHH | NC_133891.1 | 4210019 | 4210019 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1709 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHH | NC_133891.1 | 4210027 | 4210027 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1701 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHG | NC_133891.1 | 4209991 | 4209991 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1737 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CHG | NC_133891.1 | 4210004 | 4210004 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1724 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
| CG | NC_133891.1 | 4210032 | 4210032 | 0.0 | Promoter | NC_133891.1 | 4203127 | 4211728 | 8602 | 1696 | XP_074637404.1 | carbonic anhydrase-like | JBrowse |
