In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074637709.1
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5 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133892.1 | 834819 | 834819 | 0.0 | Exon | NC_133892.1 | 829020 | 839370 | 10351 | 5799 | XP_074637709.1 | metabotropic glutamate receptor-like | JBrowse |
| CHH | NC_133892.1 | 834821 | 834821 | 0.0 | Exon | NC_133892.1 | 829020 | 839370 | 10351 | 5801 | XP_074637709.1 | metabotropic glutamate receptor-like | JBrowse |
| CHH | NC_133892.1 | 834826 | 834826 | 0.0 | Exon | NC_133892.1 | 829020 | 839370 | 10351 | 5806 | XP_074637709.1 | metabotropic glutamate receptor-like | JBrowse |
| CHG | NC_133892.1 | 834813 | 834813 | 0.0 | Exon | NC_133892.1 | 829020 | 839370 | 10351 | 5793 | XP_074637709.1 | metabotropic glutamate receptor-like | JBrowse |
| CHG | NC_133892.1 | 834827 | 834827 | 0.0 | Exon | NC_133892.1 | 829020 | 839370 | 10351 | 5807 | XP_074637709.1 | metabotropic glutamate receptor-like | JBrowse |
