Gene Set Enrichment Analysis

Gene Set Enrichment Analysis

Identify significantly enriched biological functions and pathways from your gene list using Gene Set Enrichment Analysis (GSEA).

1. Select Target Species

Select Class

Select Species

148 of 326 species in CnidoSite have curated gene sets and can be analysed here; the list follows the Class selected above.

2. Choose Gene Sets for Analysis

G1: Gene Ontology Gene Sets

BP: Biological Process

CC: Cellular Component

MF: Molecular Function

G2: Gene Family Based Gene Sets

UBs: Ubiquitins

TFs: Transcription Factors

G3: KEGG Pathways

G4: Protein Domain

3. Submit Your Query Gene List

Enter gene names (one per line) 📋 Load Example

Or upload a file (max 5MB)

📁 Choose File No file chosen

4. Choose Background Genes

Suggested background (Whole genome level)

Customized background

TOP

Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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Database release r1.3 (2026-09-23) — release notes & changelog