BUSCO Gene Details in Acropora acuminata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora acuminataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 84.0% [S: 71.6%, D: 12.4%] F: 9.2%, M: 6.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,689 (84.0%)2,293 (71.6%)396 (12.4%)296 (9.2%)218 (6.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora acuminata: 3,466 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3641at6073Complete287.9178.0aacu_s0179.g47.t139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Fragmented1126.9630.0aacu_s0049.g65.t1Peripheral plasma membrane CASKJBrowse
3682at6073Complete484.3301.0aacu_s0003.g188.t1metaxin-1JBrowse
3691at6073Complete678.5374.0aacu_s0025.g41.t1Soluble calcium-activated nucleotidase 1JBrowse
3702at6073Duplicated258.1176.0aacu_s0026.g34.t2Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3702at6073Duplicated257.9176.0aacu_s0026.g34.t1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3707at6073Complete457.1265.0aacu_s0160.g36.t1protein rogdi homologJBrowse
3738at6073Fragmented591.4310.0aacu_s0058.g123.t1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3797at6073Complete544.0311.0aacu_s0066.g34.t1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Complete636.6369.0aacu_s1176.g3.t1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete863.2468.0aacu_s0028.g32.t1F-box/LRR-repeat protein 20JBrowse
3848at6073Complete938.7478.0aacu_s0067.g26.t15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Complete576.1364.0aacu_s0036.g42.t1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Complete1148.4641.0aacu_s0003.g178.t1Gamma-tubulin complex component 4JBrowse
3924at6073Complete171.376.0aacu_s0014.g24.t1signal recognition particle 9 kDa proteinJBrowse
4064at6073Complete745.6411.0aacu_s0222.g23.t1T-box transcription factor TBX3-likeJBrowse
4079at6073Duplicated325.5229.0aacu_s0006.g172.t1sorting nexin-10B-likeJBrowse
4079at6073Duplicated323.0222.0aacu_s0006.g172.t2sorting nexin-10B-likeJBrowse
4090at6073Complete316.6225.0aacu_s0226.g25.t1noggin-likeJBrowse
4117at6073Complete459.8214.0aacu_s0002.g125.t1ras-related protein Rab-5B-likeJBrowse
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