BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3797at6073Duplicated530.2315.0aflo_s0071.g45.t2mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Complete634.9369.0aflo_s0090.g24.t1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete862.2468.0aflo_s0200.g9.t1F-box/LRR-repeat protein 20JBrowse
3848at6073Complete938.9478.0aflo_s0122.g12.t15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Fragmented371.9233.0aflo_s0033.g99.t1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Duplicated134.4601.0aflo_s0028.g4.t1Gamma-tubulin complex component 4JBrowse
3911at6073Duplicated134.4601.0aflo_s0028.g4.t2Gamma-tubulin complex component 4JBrowse
3924at6073Complete171.376.0aflo_s0367.g39.t1signal recognition particle 9 kDa proteinJBrowse
4064at6073Complete868.1494.0aflo_s0011.g114.t1T-box transcription factor TBX3-likeJBrowse
4079at6073Duplicated325.4228.0aflo_s0044.g15.t1sorting nexin-10B-likeJBrowse
4079at6073Duplicated321.9221.0aflo_s0044.g15.t2sorting nexin-10B-likeJBrowse
4090at6073Complete316.9224.0aflo_s0026.g103.t1noggin-likeJBrowse
4117at6073Complete459.8214.0aflo_s0035.g39.t1ras-related protein Rab-5B-likeJBrowse
4122at6073Complete372.6179.0aflo_s0022.g25.t1Trafficking protein particle complex subunit 3JBrowse
4138at6073Complete917.7428.0aflo_s0206.g28.t1isocitrate dehydrogenase JBrowse
4148at6073Complete757.7485.0aflo_s0065.g35.t1sphingosine kinase 2-likeJBrowse
4192at6073Duplicated934.2591.0aflo_s0033.g126.t1Prolyl 3-hydroxylase 2JBrowse
4192at6073Duplicated932.0591.0aflo_s0033.g126.t2Prolyl 3-hydroxylase 2JBrowse
4196at6073Duplicated1309.1692.0aflo_s0040.g14.t3NHL repeat-containing protein 2JBrowse
4196at6073Duplicated1197.2682.0aflo_s0040.g14.t2NHL repeat-containing protein 2JBrowse
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