BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2729at6073Duplicated1128.6565.0XP_074621229.1kelch-like protein 5JBrowse
2729at6073Duplicated1116.7565.0XP_074621228.1kelch-like protein 5JBrowse
2733at6073Complete616.7346.0XP_074609775.1queuosine salvage proteinJBrowse
2778at6073Complete568.5279.0XP_074617141.1cyclin-C-likeJBrowse
2807at6073Duplicated534.2268.0XP_074632079.1Protein yif1bJBrowse
2807at6073Duplicated533.9268.0XP_074632078.1Protein yif1bJBrowse
2813at6073Complete268.6164.0XP_074620998.1NADH dehydrogenase JBrowse
2837at6073Complete534.6294.0XP_074618509.1epimerase family protein SDR39U1-likeJBrowse
2841at6073Complete690.4449.0XP_074631170.1F-box/LRR-repeat protein 2-likeJBrowse
2853at6073Duplicated921.9483.0XP_074632073.1WD repeat-containing protein 20JBrowse
2853at6073Duplicated918.5479.0XP_074632074.1WD repeat-containing protein 20JBrowse
2867at6073Complete2289.51341.0XP_074625128.1uncharacterized protein LOC113684304 isoform X1JBrowse
2886at6073Complete180.0132.0XP_074615727.1protein LTO1 homologJBrowse
2913at6073Complete476.4263.0XP_074629095.1homeobox protein SIX1JBrowse
2934at6073Complete1382.9613.0XP_074634878.1V-type proton ATPase catalytic subunit AJBrowse
2987at6073Complete1814.8953.0XP_074618253.1Vacuolar protein sorting-associated protein 18JBrowse
2993at6073Duplicated1011.7541.0XP_074605927.1protein REDUCED WALL ACETYLATION 1JBrowse
2993at6073Duplicated1011.7541.0XP_074605928.1protein REDUCED WALL ACETYLATION 1JBrowse
2993at6073Duplicated1011.4541.0XP_074605926.1protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Complete386.0211.0XP_074627428.1cilia- and flagella-associated protein 107-likeJBrowse
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