BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3805at6073Complete636.3368.0FUN_025798-T1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete844.1458.0FUN_025433-T1F-box/LRR-repeat protein 20JBrowse
3848at6073Complete938.2488.0FUN_028970-T15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Complete545.3365.0FUN_037743-T1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Complete1143.6641.0FUN_004567-T1Gamma-tubulin complex component 4JBrowse
3924at6073Complete171.376.0FUN_032346-T1signal recognition particle 9 kDa proteinJBrowse
4064at6073Complete847.3484.0FUN_015034-T1T-box transcription factor TBX3-likeJBrowse
4079at6073Complete325.5222.0FUN_022939-T1sorting nexin-10B-likeJBrowse
4090at6073Complete314.6225.0FUN_038374-T1noggin-likeJBrowse
4117at6073Fragmented364.2161.0FUN_018017-T1ras-related protein Rab-5B-likeJBrowse
4122at6073Complete372.6179.0FUN_012350-T1Trafficking protein particle complex subunit 3JBrowse
4138at6073Complete917.1427.0FUN_040783-T1isocitrate dehydrogenase JBrowse
4148at6073Complete760.9485.0FUN_038535-T1sphingosine kinase 2-likeJBrowse
4192at6073Complete934.5594.0FUN_037772-T1Prolyl 3-hydroxylase 2JBrowse
4196at6073Duplicated1198.7693.0FUN_023074-T1NHL repeat-containing protein 2JBrowse
4196at6073Duplicated1153.3646.0FUN_023074-T2NHL repeat-containing protein 2JBrowse
4204at6073Complete661.5379.0FUN_010726-T1ethanolaminephosphotransferase 1JBrowse
4265at6073Complete677.4413.0FUN_032195-T1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4273at6073Complete855.4716.0FUN_028552-T1uncharacterized protein LOC124453041 isoform X1JBrowse
4317at6073Complete2641.31244.0FUN_008079-T1methionine synthaseJBrowse
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