BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3142at6073Duplicated177.4173.0ENSOFVP00000025396.1homeobox protein MOX-1JBrowse
3154at6073Duplicated331.5161.0ENSOFVP00000036014.1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3154at6073Duplicated307.9161.0ENSOFVP00000035997.1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete719.6368.0ENSOFVP00000018623.1PR domain zinc finger protein 12JBrowse
3185at6073Duplicated872.4435.0ENSOFVP00000031476.1FAD/NAD(P)-binding domainJBrowse
3185at6073Duplicated872.1435.0ENSOFVP00000031464.1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete338.5159.0ENSOFVP00000008623.1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete683.8343.0ENSOFVP00000018945.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Duplicated712.5341.0ENSOFVP00000003746.1nucleoporin SEH1-likeJBrowse
3252at6073Duplicated643.7309.0ENSOFVP00000003732.1nucleoporin SEH1-likeJBrowse
3337at6073Duplicated1092.7503.0ENSOFVP00000014383.1pre-mRNA-processing factor 19JBrowse
3337at6073Duplicated1055.1503.0ENSOFVP00000014368.1pre-mRNA-processing factor 19JBrowse
3345at6073Complete572.5303.0ENSOFVP00000028285.1Forkhead box protein L2JBrowse
3346at6073Duplicated637.7305.0ENSOFVP00000030492.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated573.9292.0ENSOFVP00000030500.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete704.5411.0ENSOFVP00000004711.1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete575.1297.0ENSOFVP00000016306.1protein FAM166B-likeJBrowse
3507at6073Complete327.2175.0ENSOFVP00000025302.1lactoylglutathione lyase-likeJBrowse
3517at6073Complete503.7317.0ENSOFVP00000004238.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete213.0105.0ENSOFVP00000022401.160S ribosomal protein L44JBrowse
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