BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3691at6073Complete584.9375.0CAB4027267.1Soluble calcium-activated nucleotidase 1JBrowse
3702at6073Duplicated224.0177.0CAB3983289.1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3702at6073Duplicated223.0177.0CAB3983288.1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3707at6073Fragmented159.9109.0CAB4026415.1protein rogdi homologJBrowse
3738at6073Duplicated628.3383.0CAB4024473.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3738at6073Duplicated588.9339.0CAB4024474.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Complete187.784.0CAB3989501.1ubiquitin-fold modifier 1JBrowse
3768at6073Complete1229.0633.0CAB3989455.1glycogen JBrowse
3797at6073Complete494.9310.0CAB4013755.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Fragmented444.4260.0CAB4025135.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Complete423.4462.0CAB3996194.1F-box/LRR-repeat protein 20JBrowse
3848at6073Fragmented738.5359.0CAB4038786.15-aminolevulinate synthase, nonspecific, mitochondrial-likeJBrowse
3897at6073Complete476.4366.0CAB4002091.1tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4JBrowse
3911at6073Duplicated124.4538.0CAB3981956.1Gamma-tubulin complex component 4JBrowse
3911at6073Duplicated124.1538.0CAB3981955.1Gamma-tubulin complex component 4JBrowse
3924at6073Complete168.976.0CAB4000276.1signal recognition particle 9 kDa proteinJBrowse
4064at6073Duplicated531.3424.0CAB4011922.1T-box transcription factor TBX3-likeJBrowse
4064at6073Duplicated583.5419.0CAB4011921.1T-box transcription factor TBX3-likeJBrowse
4079at6073Complete272.7214.0CAB4035604.1sorting nexin-10B-likeJBrowse
4090at6073Complete256.4219.0CAB3995961.1noggin-likeJBrowse
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