BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2715at6073Duplicated359.4166.0ENSORFP00005012147.1ras-related protein Rab-2JBrowse
2715at6073Duplicated375.2165.0ENSORFP00005012152.1ras-related protein Rab-2JBrowse
2721at6073Complete1905.8947.0ENSORFP00005013118.1glycine dehydrogenase (decarboxylating), mitochondrialJBrowse
2733at6073Duplicated592.6346.0ENSORFP00005033715.1queuosine salvage proteinJBrowse
2733at6073Duplicated592.6346.0ENSORFP00005035127.1queuosine salvage proteinJBrowse
2733at6073Duplicated591.8346.0ENSORFP00005040216.1queuosine salvage proteinJBrowse
2733at6073Duplicated591.3344.0ENSORFP00005035134.1queuosine salvage proteinJBrowse
2733at6073Duplicated590.5344.0ENSORFP00005040232.1queuosine salvage proteinJBrowse
2778at6073Duplicated558.5279.0ENSORFP00005006072.1cyclin-C-likeJBrowse
2778at6073Duplicated558.4279.0ENSORFP00005006064.1cyclin-C-likeJBrowse
2807at6073Complete532.4268.0ENSORFP00005010217.1Protein yif1bJBrowse
2837at6073Duplicated519.1294.0ENSORFP00005012931.1epimerase family protein SDR39U1-likeJBrowse
2837at6073Duplicated519.1294.0ENSORFP00005044312.1epimerase family protein SDR39U1-likeJBrowse
2841at6073Duplicated655.0448.0ENSORFP00005048170.1F-box/LRR-repeat protein 2-likeJBrowse
2841at6073Duplicated654.7448.0ENSORFP00005012746.1F-box/LRR-repeat protein 2-likeJBrowse
2841at6073Duplicated567.1399.0ENSORFP00005038113.1F-box/LRR-repeat protein 2-likeJBrowse
2867at6073Complete2224.51376.0ENSORFP00005019246.1uncharacterized protein LOC113684304 isoform X1JBrowse
2886at6073Complete160.1117.0ENSORFP00005033160.1protein LTO1 homologJBrowse
2913at6073Complete470.8262.0ENSORFP00005015015.1homeobox protein SIX1JBrowse
2934at6073Complete1370.2613.0ENSORFP00005007023.1V-type proton ATPase catalytic subunit AJBrowse
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