BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 5,658 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2385at6073Duplicated273.4245.0BRAKERIOWP00000002660.1polyhomeotic-like protein 2JBrowse
2385at6073Duplicated273.4245.0g12358.t1.1polyhomeotic-like protein 2JBrowse
2440at6073Duplicated305.1233.0BRAKERIOWP00000005267.1uncharacterized protein LOC116287038JBrowse
2440at6073Duplicated305.1233.0g11627.t1.1uncharacterized protein LOC116287038JBrowse
2456at6073Duplicated190.7171.0BRAKERIOWP00000005720.1transmembrane protein 267-likeJBrowse
2456at6073Duplicated190.7171.0g16570.t1.1transmembrane protein 267-likeJBrowse
2501at6073Duplicated249.9116.0BRAKERIOWP00000013920.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2501at6073Duplicated249.9116.0g8227.t1.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Duplicated509.8285.0BRAKERIOWP00000008789.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2559at6073Duplicated509.8285.0g15643.t1.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Duplicated994.8604.0BRAKERIOWP00000010831.1serine/threonine-protein kinase PLK1JBrowse
2568at6073Duplicated994.8604.0g3850.t1.1serine/threonine-protein kinase PLK1JBrowse
2570at6073Duplicated336.5228.0BRAKERIOWP00000007024.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2570at6073Duplicated336.5228.0g14457.t1.1phospholysine phosphohistidine inorganic pyrophosphate phosphatase-likeJBrowse
2617at6073Duplicated218.3205.0BRAKERIOWP00000007759.1interferon regulatory factor 1JBrowse
2617at6073Duplicated218.3205.0g6867.t1.1interferon regulatory factor 1JBrowse
2633at6073Duplicated1138.7678.0BRAKERIOWP00000009218.1Cleavage stimulation factor subunit 3JBrowse
2633at6073Duplicated1138.7678.0g18081.t1.1Cleavage stimulation factor subunit 3JBrowse
2655at6073Duplicated236.2136.0BRAKERIOWP00000011504.1protein CFAP276JBrowse
2655at6073Duplicated236.2136.0g19767.t1.1protein CFAP276JBrowse
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