BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73198at6073Complete1528.9801.0pspe_0.1.m1.62425.m1oxysterol-binding protein 1JBrowse
73199at6073Complete267.8160.0pspe_0.1.m1.14851.m1NADH dehydrogenase JBrowse
73206at6073Complete856.4460.0pspe_0.1.m1.53898.m1calcium-binding mitochondrial carrier protein SCaMC-2JBrowse
73207at6073Complete339.0175.0pspe_0.1.m1.16363.m1protein YIPF6-likeJBrowse
73215at6073Complete1275.8662.0pspe_0.1.m1.30052.m1AFG3-like protein 2JBrowse
73217at6073Fragmented708.1360.0pspe_0.1.m1.54028.m1Cell division control protein 45JBrowse
73222at6073Complete495.3275.0pspe_0.1.m1.56773.m1tRNA N(3)-methylcytidine methyltransferase METTL2-likeJBrowse
73230at6073Complete376.0208.0pspe_0.1.m1.25111.m1V-type proton ATPase subunit EJBrowse
73232at6073Complete1827.4875.0pspe_0.1.m1.13973.m1Cilia- and flagella-associated protein 58JBrowse
73233at6073Complete745.0388.0pspe_0.1.m1.18685.m160S ribosomal export protein NMD3-likeJBrowse
73238at6073Complete1044.1589.0pspe_0.1.m1.56291.m1palmitoyltransferase ZDHHC17JBrowse
73239at6073Complete846.1442.0pspe_0.1.m1.28851.m1adenylate kinase 8JBrowse
73242at6073Complete524.0290.0pspe_0.1.m1.20672.m1lysosomal thioesterase PPT2-like isoform X1JBrowse
73244at6073Complete293.1203.0pspe_0.1.m1.64286.m1NF-kappa-B inhibitor-interacting Ras-like protein 1JBrowse
73245at6073Complete369.8207.0pspe_0.1.m1.24837.m1rRNA N6-adenosine-methyltransferase METTL5-likeJBrowse
73247at6073Complete1199.3577.0pspe_0.1.m1.5755.m1GTP-binding protein 1JBrowse
73248at6073Complete495.4275.0pspe_0.1.m1.14216.m1Ribosome production factor 2JBrowse
73249at6073Fragmented623.9389.0pspe_0.1.m1.57384.m1E3 ubiquitin-protein ligase TRAF7-likeJBrowse
73252at6073Complete265.1188.0pspe_0.1.m1.17056.m139S ribosomal protein L15, mitochondrialJBrowse
73263at6073Complete454.6241.0pspe_0.1.m1.44304.m1L-xylulose reductase-likeJBrowse
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