BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73314at6073Complete1464.0912.0HOLI00062.G37247transportin-3JBrowse
73321at6073Complete556.1311.0HOLI00033.G48170ubiquitin-like domain-containing CTD phosphatase 1JBrowse
73323at6073Complete326.3215.0HOLI03847.G34736gamma-secretase subunit Aph-1JBrowse
73329at6073Complete165.6113.0HOLI02454.G26705BET1-like proteinJBrowse
73336at6073Complete412.6230.0HOLI00369.G13575protein lifeguard 4JBrowse
73341at6073Complete255.0156.0HOLI00026.G11607riboflavin kinaseJBrowse
73344at6073Complete1494.01003.0HOLI01933.G7904alpha-mannosidase 2x-likeJBrowse
73348at6073Fragmented245.6148.0HOLI00004.G7925sperm axonemal maintenance protein CFAP97D1-likeJBrowse
73352at6073Complete513.6342.0HOLI02240.G58207Activator of 90 kDa heat shock protein ATPase 1JBrowse
73353at6073Complete308.9242.0HOLI01573.G43819rab-like protein 3JBrowse
73362at6073Complete474.2285.0HOLI01893.G57374ER membrane complex subunit 2JBrowse
73375at6073Complete595.6400.0HOLI00544.G22298uncharacterized protein LOC130655131 isoform X1JBrowse
73377at6073Complete276.7184.0HOLI02187.G31463Mediator of RNA polymerase II transcription subunit 18JBrowse
73381at6073Duplicated143.992.0HOLI00579.G29243Ragulator complex protein lamtor4JBrowse
73381at6073Duplicated143.992.0HOLI04099.G45425Ragulator complex protein lamtor4JBrowse
73385at6073Complete340.1222.0HOLI01392.G14892Small ribosomal subunit protein uS2JBrowse
73387at6073Complete461.1323.0HOLI02938.G29726ceramide phosphoethanolamine synthase-likeJBrowse
73393at6073Complete702.5447.0HOLI01139.G56651cytoplasmic polyadenylation element-binding protein 1JBrowse
73394at6073Complete769.7469.0HOLI00520.G48832vang-like protein 2JBrowse
73395at6073Complete1183.4824.0HOLI01769.G3617VinculinJBrowse
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