BUSCO Gene Details in Montipora capitata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora capitataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 63.3% [S: 62.7%, D: 0.5%] F: 15.4%, M: 21.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,026 (63.3%)2,009 (62.7%)17 (0.5%)494 (15.4%)683 (21.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Montipora capitata: 2,540 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74787at6073Duplicated177.8104.0g28925.t1DNA polymerase epsilon subunit 4JBrowse
74788at6073Complete638.9388.0g4726.t1RAB6A-GEF complex partner protein 2JBrowse
74793at6073Complete563.3350.0g6805.t1HIV Tat-specific factor 1JBrowse
74799at6073Complete697.0373.0g19188.t13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete432.7253.0g5609.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74829at6073Complete851.8424.0g5522.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Fragmented337.4215.0g6.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Complete900.6503.0g2871.t1USP6 N-terminal-like proteinJBrowse
74842at6073Complete522.0368.0g10465.t1WD repeat-containing 18JBrowse
74851at6073Complete783.1422.0g16499.t1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete225.1133.0g31334.t1mitochondrial fission 1 protein-likeJBrowse
74858at6073Complete1486.1946.0g5100.t1MORC family CW-type zinc finger protein 2A-likeJBrowse
74869at6073Complete450.0261.0g704.t1methyl-CpG-binding domain protein 2JBrowse
74874at6073Complete1496.2872.0g17055.t1coiled-coil domain-containing protein 40JBrowse
74876at6073Complete687.2486.0g16268.t1WD40 repeatJBrowse
74881at6073Complete1012.0704.0g16523.t1uncharacterized protein LOC116295118 isoform X1JBrowse
74884at6073Complete291.9177.0g3768.t1Tetratricopeptide repeat protein 36JBrowse
74896at6073Complete774.2483.0g13401.t1Sestrin-1JBrowse
74898at6073Complete1362.8807.0g27480.t1Small G protein signaling modulator 2JBrowse
74920at6073Complete167.181.0g2296.t1N-alpha-acetyltransferase 38, NatC auxiliary subunit-likeJBrowse
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