BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73403at6073Complete1613.4829.0pspe_0.1.m1.20629.m1major vault proteinJBrowse
73404at6073Complete326.6164.0pspe_0.1.m1.25062.m1Charged multivesicular body protein 1AJBrowse
73414at6073Complete2353.91155.0pspe_0.1.m1.29464.m1DNA topoisomerase 2-alpha-likeJBrowse
73416at6073Complete1485.0785.0pspe_0.1.m1.48152.m1sodium/calcium exchanger 3JBrowse
73418at6073Complete1647.6877.0pspe_0.1.m1.26465.m1glutamate receptor ionotropic, NMDA 1JBrowse
73422at6073Complete358.7212.0pspe_0.1.m1.51383.m1acyl-protein thioesteraseJBrowse
73430at6073Complete404.4249.0pspe_0.1.m1.70482.m1HUWE1-associated protein modifying stress responsesJBrowse
73432at6073Complete531.6269.0pspe_0.1.m1.41836.m1palmitoyltransferase ZDHHC3-likeJBrowse
73434at6073Complete1376.7711.0pspe_0.1.m1.24192.m1muskelinJBrowse
73441at6073Complete474.7216.0pspe_0.1.m1.48928.m1Ras-related protein Rab-11AJBrowse
73442at6073Complete567.6298.0pspe_0.1.m1.35726.m12,4-dienoyl-CoA reductase JBrowse
73443at6073Complete656.3379.0pspe_0.1.m1.12250.m1nitrogen permease regulator 2-like proteinJBrowse
73444at6073Complete827.6465.0pspe_0.1.m1.64908.m1E3 ubiquitin-protein ligase MYLIPJBrowse
73448at6073Complete1278.9742.0pspe_0.1.m1.44604.m1serine/threonine-protein kinase/endoribonuclease IRE1-likeJBrowse
73449at6073Complete535.3331.0pspe_0.1.m1.30790.m1uncharacterized protein LOC110056401JBrowse
73454at6073Complete793.8415.0pspe_0.1.m1.10765.m1transcriptional adapter 2-beta-likeJBrowse
73465at6073Complete2452.81346.0pspe_0.1.m1.23108.m1protein unc-13 homolog AJBrowse
73466at6073Complete496.5259.0pspe_0.1.m1.10455.m1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1JBrowse
73467at6073Complete234.8126.0pspe_0.1.m1.49140.m1keratinocyte-associated protein 2JBrowse
73470at6073Complete865.4420.0pspe_0.1.m1.19803.m1Flotillin-2JBrowse
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