BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73518at6073Complete492.9294.0HOLI02847.G5052PDZ domain-containing GIPC2JBrowse
73526at6073Complete935.8572.0HOLI01043.G8707sperm-associated antigen 16 protein-likeJBrowse
73533at6073Complete1391.01001.0HOLI02615.G42315mitogen-activated protein kinase kinase kinase 1JBrowse
73538at6073Complete849.7530.0HOLI00876.G203TBC1 domain family member 22B-likeJBrowse
73547at6073Complete1063.9606.0HOLI01535.G41475ATP-dependent RNA helicase DDX42-likeJBrowse
73550at6073Complete794.2499.0HOLI00086.G60415alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase AJBrowse
73553at6073Complete438.5269.0HOLI01475.G6920calcium uniporter protein, mitochondrial-likeJBrowse
73559at6073Complete1789.91069.0HOLI00015.G47158probable ATP-dependent RNA helicase DHX34JBrowse
73563at6073Duplicated166.0111.0HOLI02298.G55915elongin-BJBrowse
73563at6073Duplicated165.9111.0HOLI01854.G45376elongin-BJBrowse
73564at6073Complete1528.9921.0HOLI00476.G24055Poly JBrowse
73567at6073Complete504.5307.0HOLI00635.G45006Glutaredoxin-3JBrowse
73568at6073Complete1025.0632.0HOLI01071.G11480Signal recognition particle receptor subunit alphaJBrowse
73571at6073Fragmented345.8255.0HOLI02007.G93745 kDa calcium-bindingJBrowse
73572at6073Fragmented688.5458.0HOLI03104.G48908Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1JBrowse
73590at6073Complete678.1405.0HOLI00441.G4751326S proteasome non-ATPase regulatory subunit 11AJBrowse
73594at6073Complete788.5499.0HOLI02016.G15756U3 small nucleolar RNA-associated protein 15JBrowse
73596at6073Complete273.5178.0HOLI02423.G12794adenine phosphoribosyltransferase-likeJBrowse
73598at6073Duplicated544.2391.0HOLI00150.G2369acetyl-CoA acetyltransferase, cytosolic-likeJBrowse
73598at6073Duplicated502.8391.0HOLI00001.G52113acetyl-CoA acetyltransferase, cytosolic-likeJBrowse
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