BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4192at6073Duplicated932.4594.0alor_g12660.t2Prolyl 3-hydroxylase 2JBrowse
4192at6073Duplicated930.0594.0alor_g12660.t1Prolyl 3-hydroxylase 2JBrowse
4196at6073Complete1198.7690.0alor_g21235.t1NHL repeat-containing protein 2JBrowse
4204at6073Complete536.8319.0alor_g9522.t1ethanolaminephosphotransferase 1JBrowse
4265at6073Duplicated590.9368.0alor_g7225.t2tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated536.3368.0alor_g7225.t1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4273at6073Complete848.8716.0alor_g17478.t1uncharacterized protein LOC124453041 isoform X1JBrowse
4317at6073Complete2504.01198.0alor_g25170.t1methionine synthaseJBrowse
4355at6073Complete870.9429.0alor_g1458.t1actin-like protein 6BJBrowse
4370at6073Complete397.2217.0alor_g22999.t1exosome complex component RRP46-likeJBrowse
4400at6073Complete815.7391.0alor_g14593.t1COP9 signalosome complex subunit 4JBrowse
4403at6073Complete1272.6589.0alor_g15103.t1electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrialJBrowse
4413at6073Complete541.1326.0alor_g13181.t1ADP-ribose glycohydrolase ARH3-likeJBrowse
4441at6073Complete868.8421.0alor_g13518.t1multifunctional protein ADE2-likeJBrowse
4489at6073Complete746.5376.0alor_g10025.t1Cytohesin-1JBrowse
4507at6073Complete467.5266.0alor_g25934.t1Armadillo repeat-containing protein 1JBrowse
4640at6073Complete215.7133.0alor_g16750.t1MORN repeat-containing protein 2JBrowse
4644at6073Complete1348.2822.0alor_g18516.t1DNA-binding protein RFX6-likeJBrowse
4679at6073Complete304.7140.0alor_g3647.t1large ribosomal subunit protein uL14JBrowse
4720at6073Complete223.6133.0alor_g25672.t1Zinc finger SWIM domain-containing protein 7JBrowse
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