BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4117at6073Complete459.8214.0amic_s0225.g2.t1ras-related protein Rab-5B-likeJBrowse
4122at6073Complete372.6179.0amic_s0025.g177.t1Trafficking protein particle complex subunit 3JBrowse
4138at6073Complete917.1428.0amic_s0039.g2.t1isocitrate dehydrogenase JBrowse
4148at6073Complete759.7485.0amic_s0008.g42.t1sphingosine kinase 2-likeJBrowse
4192at6073Complete892.9593.0amic_s0014.g59.t1Prolyl 3-hydroxylase 2JBrowse
4196at6073Complete1201.4693.0amic_s0113.g31.t1NHL repeat-containing protein 2JBrowse
4204at6073Complete663.0379.0amic_s0068.g19.t1ethanolaminephosphotransferase 1JBrowse
4265at6073Duplicated661.0414.0amic_s0146.g51.t2tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4265at6073Duplicated652.3397.0amic_s0146.g51.t1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4273at6073Complete803.2644.0amic_s0060.g11.t1uncharacterized protein LOC124453041 isoform X1JBrowse
4317at6073Complete2350.71155.0amic_s0140.g46.t1methionine synthaseJBrowse
4355at6073Complete871.9429.0amic_s0063.g70.t1actin-like protein 6BJBrowse
4400at6073Complete824.8403.0amic_s0054.g26.t1COP9 signalosome complex subunit 4JBrowse
4403at6073Complete1271.1589.0amic_s0075.g27.t1electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrialJBrowse
4413at6073Complete538.6326.0amic_s0159.g23.t1ADP-ribose glycohydrolase ARH3-likeJBrowse
4441at6073Complete872.6421.0amic_s0324.g20.t1multifunctional protein ADE2-likeJBrowse
4489at6073Complete746.5376.0amic_s0005.g135.t1Cytohesin-1JBrowse
4507at6073Complete386.2221.0amic_s0152.g23.t1Armadillo repeat-containing protein 1JBrowse
4640at6073Complete250.9145.0amic_s0127.g96.t1MORN repeat-containing protein 2JBrowse
4644at6073Complete1431.8845.0amic_s0101.g89.t1DNA-binding protein RFX6-likeJBrowse
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