BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora milleporaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 97.9% [S: 70.7%, D: 27.3%] F: 0.4%, M: 1.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,137 (97.9%)2,264 (70.7%)873 (27.3%)14 (0.4%)52 (1.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora millepora: 4,695 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3112at6073Duplicated837.3483.0XP_029182686.2fukutin-related protein-likeJBrowse
3114at6073Duplicated506.5285.0XP_029194878.2General transcription factor IIH subunit 3JBrowse
3114at6073Duplicated448.8256.0XP_029194891.2General transcription factor IIH subunit 3JBrowse
3139at6073Complete634.9373.0XP_029202801.2THUMP domain-containing 3JBrowse
3142at6073Complete256.0194.0XP_029187856.2homeobox protein MOX-1JBrowse
3154at6073Complete328.1161.0XP_029182735.1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Duplicated714.4366.0XP_029211845.2PR domain zinc finger protein 12JBrowse
3172at6073Duplicated681.4366.0XP_044180858.1PR domain zinc finger protein 12JBrowse
3185at6073Complete868.5427.0XP_029194822.1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete335.7159.0XP_029210291.1N-alpha-acetyltransferase 50JBrowse
3247at6073Complete668.8344.0XP_029208313.2Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete703.5339.0XP_029186483.2nucleoporin SEH1-likeJBrowse
3337at6073Complete1091.8503.0XP_029194666.2pre-mRNA-processing factor 19JBrowse
3345at6073Duplicated570.1304.0XP_029206686.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_029206693.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_029206699.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_029206706.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_029206714.1Forkhead box protein L2JBrowse
3346at6073Duplicated635.1306.0XP_029201270.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated637.7304.0XP_029201271.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
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