BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3025at6073Complete438.3218.0XP_074619853.1proteasome subunit beta type-1-AJBrowse
3028at6073Complete170.7112.0XP_074622002.1replication protein A 14 kDa subunit-likeJBrowse
3034at6073Duplicated720.1345.0XP_074615180.1galactose-1-phosphate uridylyltransferase-likeJBrowse
3034at6073Duplicated667.8320.0XP_074615188.1galactose-1-phosphate uridylyltransferase-likeJBrowse
3047at6073Complete458.1289.0XP_074607659.1F-box/LRR-repeat protein 15JBrowse
3050at6073Complete536.4345.0XP_074639682.1Peroxisomal biogenesis factor 3JBrowse
3060at6073Complete756.6465.0XP_074622605.1pyruvate dehydrogenase JBrowse
3078at6073Complete1264.8703.0XP_074606624.1exostosin-1-likeJBrowse
3099at6073Complete866.8512.0XP_074608303.1prolyl 4-hydroxylase subunit alpha-1JBrowse
3107at6073Complete503.9351.0XP_074613188.1Transcription factor SOX-17JBrowse
3112at6073Complete838.3483.0XP_074628522.1fukutin-related protein-likeJBrowse
3114at6073Duplicated506.1285.0XP_074636323.1General transcription factor IIH subunit 3JBrowse
3114at6073Duplicated504.3285.0XP_074636322.1General transcription factor IIH subunit 3JBrowse
3139at6073Complete639.1373.0XP_074630974.1THUMP domain-containing 3JBrowse
3142at6073Complete254.8194.0XP_074624593.1homeobox protein MOX-1JBrowse
3154at6073Duplicated328.2161.0XP_074619712.1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3154at6073Duplicated312.9161.0XP_074619711.1LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30 homologJBrowse
3172at6073Complete712.5366.0XP_074633830.1PR domain zinc finger protein 12JBrowse
3185at6073Complete863.3427.0XP_074607933.1FAD/NAD(P)-binding domainJBrowse
3192at6073Complete335.7159.0XP_074633075.1N-alpha-acetyltransferase 50JBrowse
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